Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.09□□□□□ -0.15
Trim33Q99PP7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Gm24158-201ENSMUST00000175263 71 ntBASIC14.09□□□□□ -0.15
Trim33Q99PP7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.09□□□□□ -0.15
Trim33Q99PP7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.09□□□□□ -0.15
Trim33Q99PP7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim33Q99PP7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim33Q99PP7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim33Q99PP7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim33Q99PP7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Gm23547-201ENSMUST00000158210 271 ntBASIC14.08□□□□□ -0.16
Trim33Q99PP7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Gm10253-201ENSMUST00000194270 940 ntBASIC14.08□□□□□ -0.16
Trim33Q99PP7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Gm18049-201ENSMUST00000208909 581 ntBASIC14.08□□□□□ -0.16
Trim33Q99PP7 Gm45925-201ENSMUST00000218882 744 ntBASIC14.08□□□□□ -0.16
Trim33Q99PP7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.08□□□□□ -0.16
Trim33Q99PP7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim33Q99PP7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.07□□□□□ -0.16
Trim33Q99PP7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim33Q99PP7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Trim33Q99PP7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.07□□□□□ -0.16
Trim33Q99PP7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Gm14042-201ENSMUST00000120139 833 ntBASIC14.07□□□□□ -0.16
Trim33Q99PP7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Trim33Q99PP7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Gm7774-201ENSMUST00000200064 533 ntBASIC14.07□□□□□ -0.16
Trim33Q99PP7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trim33Q99PP7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim33Q99PP7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.06□□□□□ -0.16
Trim33Q99PP7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms