Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Gm11591-201ENSMUST00000120063 702 ntBASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Gm6407-201ENSMUST00000176468 549 ntBASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh23Q99PF4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Gm14017-201ENSMUST00000121934 386 ntBASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Gm12566-201ENSMUST00000121479 359 ntBASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh23Q99PF4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Gm14028-201ENSMUST00000117434 479 ntBASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Gm5051-201ENSMUST00000204085 485 ntBASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Gm13123-201ENSMUST00000122173 492 ntBASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh23Q99PF4 Gm29608-201ENSMUST00000190444 463 ntBASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms