Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4Q99P72 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rtn4Q99P72 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4Q99P72 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4Q99P72 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4Q99P72 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4Q99P72 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.31■□□□□ 0.52
Rtn4Q99P72 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4Q99P72 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4Q99P72 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4Q99P72 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4Q99P72 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Gm44554-201ENSMUST00000208738 147 ntBASIC18.3■□□□□ 0.52
Rtn4Q99P72 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.3■□□□□ 0.52
Rtn4Q99P72 AC153522.1-201ENSMUST00000220047 1090 ntBASIC18.3■□□□□ 0.52
Rtn4Q99P72 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 AC158595.1-201ENSMUST00000217989 1435 ntBASIC18.3■□□□□ 0.52
Rtn4Q99P72 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4Q99P72 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC18.29■□□□□ 0.52
Rtn4Q99P72 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Gm18737-201ENSMUST00000173594 937 ntBASIC18.29■□□□□ 0.52
Rtn4Q99P72 Gm43767-201ENSMUST00000198933 381 ntBASIC18.29■□□□□ 0.52
Rtn4Q99P72 Gm43553-201ENSMUST00000200900 685 ntBASIC18.29■□□□□ 0.52
Rtn4Q99P72 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4Q99P72 Gm38391-201ENSMUST00000191720 4069 ntBASIC18.28■□□□□ 0.52
Rtn4Q99P72 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Gm43052-201ENSMUST00000201451 1628 ntBASIC18.28■□□□□ 0.52
Rtn4Q99P72 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Gm13223-201ENSMUST00000118609 747 ntBASIC18.28■□□□□ 0.52
Rtn4Q99P72 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms