Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Gm1401-201ENSMUST00000122048 772 ntBASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdk5rap3Q99LM2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Mir8117-201ENSMUST00000184773 107 ntBASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Gm20553-201ENSMUST00000204205 844 ntBASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Gm5364-201ENSMUST00000216789 889 ntBASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cdk5rap3Q99LM2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms