Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.86□□□□□ -0.03
Clp1Q99LI9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.86□□□□□ -0.03
Clp1Q99LI9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.86□□□□□ -0.03
Clp1Q99LI9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.86□□□□□ -0.03
Clp1Q99LI9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.85□□□□□ -0.03
Clp1Q99LI9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.85□□□□□ -0.03
Clp1Q99LI9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clp1Q99LI9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.85□□□□□ -0.03
Clp1Q99LI9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.84□□□□□ -0.03
Clp1Q99LI9 Gm40466-201ENSMUST00000212174 422 ntBASIC14.84□□□□□ -0.03
Clp1Q99LI9 Gm18473-201ENSMUST00000220543 868 ntBASIC14.84□□□□□ -0.03
Clp1Q99LI9 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.84□□□□□ -0.03
Clp1Q99LI9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clp1Q99LI9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clp1Q99LI9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Clp1Q99LI9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clp1Q99LI9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.83□□□□□ -0.03
Clp1Q99LI9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clp1Q99LI9 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.83□□□□□ -0.03
Clp1Q99LI9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Clp1Q99LI9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clp1Q99LI9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clp1Q99LI9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clp1Q99LI9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clp1Q99LI9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clp1Q99LI9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.83□□□□□ -0.04
Clp1Q99LI9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.83□□□□□ -0.04
Clp1Q99LI9 Gm27572-201ENSMUST00000183702 255 ntBASIC14.83□□□□□ -0.04
Clp1Q99LI9 Gm5370-201ENSMUST00000187187 574 ntBASIC14.83□□□□□ -0.04
Clp1Q99LI9 Gm43818-201ENSMUST00000200605 466 ntBASIC14.83□□□□□ -0.04
Clp1Q99LI9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.83□□□□□ -0.04
Clp1Q99LI9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Clp1Q99LI9 Mir497b-201ENSMUST00000093601 125 ntBASIC14.83□□□□□ -0.04
Clp1Q99LI9 Olfr582-201ENSMUST00000098212 960 ntBASIC14.83□□□□□ -0.04
Clp1Q99LI9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms