Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cstf3Q99LI7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cstf3Q99LI7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cstf3Q99LI7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cstf3Q99LI7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cstf3Q99LI7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cstf3Q99LI7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cstf3Q99LI7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.71□□□□□ -0.22
Cstf3Q99LI7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cstf3Q99LI7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf3Q99LI7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Gm43514-201ENSMUST00000198852 424 ntBASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cstf3Q99LI7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.68□□□□□ -0.22
Cstf3Q99LI7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Gm5264-201ENSMUST00000190584 848 ntBASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms