Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Gm18737-201ENSMUST00000173594 937 ntBASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Gm18889-201ENSMUST00000174284 929 ntBASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vmp1Q99KU0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Mir6990-201ENSMUST00000183724 91 ntBASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Gm44335-201ENSMUST00000196879 141 ntBASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Gm44297-201ENSMUST00000198304 141 ntBASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Gm44346-201ENSMUST00000198851 141 ntBASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vmp1Q99KU0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Gm14701-201ENSMUST00000117156 348 ntBASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Gm8396-201ENSMUST00000057361 823 ntBASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vmp1Q99KU0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vmp1Q99KU0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vmp1Q99KU0 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.66□□□□□ -0.22
Vmp1Q99KU0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vmp1Q99KU0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vmp1Q99KU0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vmp1Q99KU0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vmp1Q99KU0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vmp1Q99KU0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vmp1Q99KU0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.66□□□□□ -0.22
Vmp1Q99KU0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.66□□□□□ -0.22
Vmp1Q99KU0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms