Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.27■□□□□ 0.2
Rfc4Q99J62 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.27■□□□□ 0.2
Rfc4Q99J62 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.27■□□□□ 0.2
Rfc4Q99J62 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Gm18905-201ENSMUST00000205454 928 ntBASIC16.27■□□□□ 0.2
Rfc4Q99J62 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.27■□□□□ 0.19
Rfc4Q99J62 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfc4Q99J62 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfc4Q99J62 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfc4Q99J62 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfc4Q99J62 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfc4Q99J62 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfc4Q99J62 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfc4Q99J62 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rfc4Q99J62 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.26■□□□□ 0.19
Rfc4Q99J62 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rfc4Q99J62 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.26■□□□□ 0.19
Rfc4Q99J62 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.26■□□□□ 0.19
Rfc4Q99J62 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.26■□□□□ 0.19
Rfc4Q99J62 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfc4Q99J62 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.25■□□□□ 0.19
Rfc4Q99J62 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.25■□□□□ 0.19
Rfc4Q99J62 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rfc4Q99J62 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Gm15240-201ENSMUST00000118156 720 ntBASIC16.24■□□□□ 0.19
Rfc4Q99J62 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.24■□□□□ 0.19
Rfc4Q99J62 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.24■□□□□ 0.19
Rfc4Q99J62 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfc4Q99J62 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms