Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Gm5479-201ENSMUST00000160578 435 ntBASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Gm27459-201ENSMUST00000184860 107 ntBASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd1Q99J36 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.62□□□□□ -0.39
Thumpd1Q99J36 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd1Q99J36 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms