Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Mir6420-201ENSMUST00000185032 102 ntBASIC16.35■□□□□ 0.21
Smc1bQ920F6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.35■□□□□ 0.21
Smc1bQ920F6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc1bQ920F6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smc1bQ920F6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc1bQ920F6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc1bQ920F6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc1bQ920F6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc1bQ920F6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc1bQ920F6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc1bQ920F6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc1bQ920F6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc1bQ920F6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Smc1bQ920F6 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.33■□□□□ 0.21
Smc1bQ920F6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Gm11918-201ENSMUST00000121660 179 ntBASIC16.33■□□□□ 0.2
Smc1bQ920F6 Gm17150-201ENSMUST00000165577 381 ntBASIC16.33■□□□□ 0.2
Smc1bQ920F6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smc1bQ920F6 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.33■□□□□ 0.2
Smc1bQ920F6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms