Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.06■□□□□ 0
Pcdha9Q91Y11 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdha9Q91Y11 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha9Q91Y11 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Pcdha9Q91Y11 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdha9Q91Y11 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pcdha9Q91Y11 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdha9Q91Y11 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdha9Q91Y11 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdha9Q91Y11 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Pcdha9Q91Y11 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Gm15460-201ENSMUST00000118147 391 ntBASIC15.05■□□□□ -0
Pcdha9Q91Y11 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Gm3436-201ENSMUST00000179930 840 ntBASIC15.05■□□□□ -0
Pcdha9Q91Y11 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.05■□□□□ -0
Pcdha9Q91Y11 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha9Q91Y11 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.04■□□□□ -0
Pcdha9Q91Y11 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Gm18027-201ENSMUST00000218947 619 ntBASIC15.04■□□□□ -0
Pcdha9Q91Y11 Gm9063-201ENSMUST00000223299 582 ntBASIC15.04■□□□□ -0
Pcdha9Q91Y11 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdha9Q91Y11 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdha9Q91Y11 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.03■□□□□ -0
Pcdha9Q91Y11 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms