Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Gm11835-201ENSMUST00000120635 663 ntBASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Gm7350-201ENSMUST00000120964 636 ntBASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Gm18766-201ENSMUST00000189811 808 ntBASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Gm29541-201ENSMUST00000191351 678 ntBASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Gm43761-201ENSMUST00000202132 991 ntBASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Gm10576-201ENSMUST00000191927 825 ntBASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Gm37230-201ENSMUST00000194491 818 ntBASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 AC115784.1-201ENSMUST00000227687 1010 ntBASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.94□□□□□ -0.18
Pcdhb20Q91XZ9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms