Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Gm27920-201ENSMUST00000183953 96 ntBASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Gm20553-201ENSMUST00000204205 844 ntBASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Gm17271-201ENSMUST00000165535 355 ntBASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb4Q91XZ6 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.08□□□□□ -0.15
Pcdhb4Q91XZ6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb4Q91XZ6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.08□□□□□ -0.15
Pcdhb4Q91XZ6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb4Q91XZ6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb4Q91XZ6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdhb4Q91XZ6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb4Q91XZ6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb4Q91XZ6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.08□□□□□ -0.15
Pcdhb4Q91XZ6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb4Q91XZ6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Gm11779-201ENSMUST00000118541 368 ntBASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Gm15467-201ENSMUST00000120582 445 ntBASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Gm44771-201ENSMUST00000206975 626 ntBASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb4Q91XZ6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms