Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usb1Q91W78 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usb1Q91W78 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usb1Q91W78 Matn2-206ENSMUST00000228570 2798 ntBASIC14.04□□□□□ -0.16
Usb1Q91W78 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usb1Q91W78 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usb1Q91W78 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usb1Q91W78 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.03□□□□□ -0.16
Usb1Q91W78 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.03□□□□□ -0.16
Usb1Q91W78 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Usb1Q91W78 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usb1Q91W78 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Usb1Q91W78 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Usb1Q91W78 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Usb1Q91W78 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Usb1Q91W78 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Usb1Q91W78 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Usb1Q91W78 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usb1Q91W78 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Usb1Q91W78 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usb1Q91W78 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Usb1Q91W78 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usb1Q91W78 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Usb1Q91W78 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usb1Q91W78 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usb1Q91W78 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usb1Q91W78 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usb1Q91W78 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usb1Q91W78 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usb1Q91W78 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usb1Q91W78 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.02□□□□□ -0.16
Usb1Q91W78 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Usb1Q91W78 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usb1Q91W78 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usb1Q91W78 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.02□□□□□ -0.17
Usb1Q91W78 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usb1Q91W78 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.02□□□□□ -0.17
Usb1Q91W78 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usb1Q91W78 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usb1Q91W78 Gm5779-201ENSMUST00000218467 910 ntBASIC14.02□□□□□ -0.17
Usb1Q91W78 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usb1Q91W78 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Usb1Q91W78 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.02□□□□□ -0.17
Usb1Q91W78 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.02□□□□□ -0.17
Usb1Q91W78 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usb1Q91W78 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Usb1Q91W78 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Usb1Q91W78 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.02□□□□□ -0.17
Usb1Q91W78 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usb1Q91W78 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usb1Q91W78 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usb1Q91W78 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usb1Q91W78 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.01□□□□□ -0.17
Usb1Q91W78 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.01□□□□□ -0.17
Usb1Q91W78 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.01□□□□□ -0.17
Usb1Q91W78 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usb1Q91W78 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Usb1Q91W78 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Usb1Q91W78 Gm14042-201ENSMUST00000120139 833 ntBASIC14.01□□□□□ -0.17
Usb1Q91W78 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Usb1Q91W78 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.01□□□□□ -0.17
Usb1Q91W78 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.01□□□□□ -0.17
Usb1Q91W78 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.01□□□□□ -0.17
Usb1Q91W78 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Usb1Q91W78 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.01□□□□□ -0.17
Usb1Q91W78 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usb1Q91W78 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usb1Q91W78 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usb1Q91W78 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usb1Q91W78 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms