Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx39aQ8VDW0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.71■□□□□ 0.11
Ddx39aQ8VDW0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx39aQ8VDW0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Ddx39aQ8VDW0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx39aQ8VDW0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ddx39aQ8VDW0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ddx39aQ8VDW0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.71■□□□□ 0.1
Ddx39aQ8VDW0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ddx39aQ8VDW0 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx39aQ8VDW0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx39aQ8VDW0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Gm37714-201ENSMUST00000194742 342 ntBASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Gm45384-201ENSMUST00000210451 277 ntBASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Gm17795-201ENSMUST00000214505 757 ntBASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Gm18027-201ENSMUST00000218947 619 ntBASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ddx39aQ8VDW0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms