Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Syt7-205ENSMUST00000224135 1557 ntBASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ndc1Q8VCB1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Gm4875-201ENSMUST00000118257 786 ntBASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Gm43703-201ENSMUST00000200523 763 ntBASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndc1Q8VCB1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Gm44487-201ENSMUST00000205145 325 ntBASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Mir125a-201ENSMUST00000083545 68 ntBASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms