Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp33Q8R5K2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Usp33Q8R5K2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp33Q8R5K2 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.27■□□□□ 0.2
Usp33Q8R5K2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Usp33Q8R5K2 Gm17794-201ENSMUST00000220252 955 ntBASIC16.27■□□□□ 0.2
Usp33Q8R5K2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp33Q8R5K2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp33Q8R5K2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Usp33Q8R5K2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp33Q8R5K2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp33Q8R5K2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp33Q8R5K2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp33Q8R5K2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Usp33Q8R5K2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp33Q8R5K2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp33Q8R5K2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.27■□□□□ 0.19
Usp33Q8R5K2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Gm12882-201ENSMUST00000121696 517 ntBASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp33Q8R5K2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Gm15957-201ENSMUST00000118893 974 ntBASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp33Q8R5K2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp33Q8R5K2 Gm27486-201ENSMUST00000184923 80 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms