Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim29Q8R2Q0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim29Q8R2Q0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.21■□□□□ 0.19
Trim29Q8R2Q0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim29Q8R2Q0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim29Q8R2Q0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim29Q8R2Q0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trim29Q8R2Q0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trim29Q8R2Q0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
Trim29Q8R2Q0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim29Q8R2Q0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim29Q8R2Q0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim29Q8R2Q0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim29Q8R2Q0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Gm8584-201ENSMUST00000171982 758 ntBASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Chchd1-203ENSMUST00000224633 557 ntBASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim29Q8R2Q0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm22065-201ENSMUST00000103753 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm22066-201ENSMUST00000103761 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm24932-201ENSMUST00000103763 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm24115-201ENSMUST00000103799 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm22190-201ENSMUST00000103827 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm22191-201ENSMUST00000103831 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm24721-201ENSMUST00000103849 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm28018-201ENSMUST00000103869 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm26399-201ENSMUST00000103937 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm25349-201ENSMUST00000177728 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm23616-201ENSMUST00000177797 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm25871-201ENSMUST00000177816 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm24752-201ENSMUST00000178240 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm24496-201ENSMUST00000178287 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm25649-201ENSMUST00000178476 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm25548-201ENSMUST00000178681 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm23147-201ENSMUST00000178841 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm26095-201ENSMUST00000179270 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm22171-201ENSMUST00000179283 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm23936-201ENSMUST00000179354 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm22619-201ENSMUST00000179516 110 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms