Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Gm13369-201ENSMUST00000119442 987 ntBASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Gm27341-201ENSMUST00000183570 106 ntBASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Rps4l-202ENSMUST00000204242 789 ntBASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx54Q8K4L0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Gm6203-201ENSMUST00000209575 1342 ntBASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx54Q8K4L0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Gm15370-201ENSMUST00000117158 253 ntBASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Gm25261-201ENSMUST00000157416 134 ntBASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Gm4819-201ENSMUST00000182170 1009 ntBASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx54Q8K4L0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms