Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Gm8097-201ENSMUST00000117903 829 ntBASIC8.91□□□□□ -0.98
Cystm1Q8K353 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC8.91□□□□□ -0.98
Cystm1Q8K353 Gm11764-201ENSMUST00000120221 623 ntBASIC8.91□□□□□ -0.98
Cystm1Q8K353 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Mir5131-201ENSMUST00000175426 93 ntBASIC8.91□□□□□ -0.98
Cystm1Q8K353 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 AW822252-206ENSMUST00000208904 237 ntBASIC8.91□□□□□ -0.98
Cystm1Q8K353 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Ksr1-207ENSMUST00000226282 5260 ntBASIC8.91□□□□□ -0.98
Cystm1Q8K353 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Cystm1Q8K353 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC8.9□□□□□ -0.98
Cystm1Q8K353 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC8.9□□□□□ -0.98
Cystm1Q8K353 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Gm3928-201ENSMUST00000121141 1307 ntBASIC8.9□□□□□ -0.98
Cystm1Q8K353 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Gm13418-201ENSMUST00000119097 944 ntBASIC8.9□□□□□ -0.98
Cystm1Q8K353 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC8.9□□□□□ -0.98
Cystm1Q8K353 Gm7506-201ENSMUST00000207758 815 ntBASIC8.9□□□□□ -0.98
Cystm1Q8K353 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Prkcz2-201ENSMUST00000206136 1756 ntBASIC8.9□□□□□ -0.98
Cystm1Q8K353 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Cystm1Q8K353 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Cystm1Q8K353 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms