Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm15957-201ENSMUST00000118893 974 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm29310-201ENSMUST00000185468 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21825-201ENSMUST00000185728 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm29109-201ENSMUST00000185895 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21896-201ENSMUST00000186520 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21873-201ENSMUST00000186728 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21794-201ENSMUST00000187056 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21880-201ENSMUST00000187275 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21826-201ENSMUST00000187451 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21198-201ENSMUST00000188393 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21749-201ENSMUST00000189343 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21901-201ENSMUST00000189568 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm29424-201ENSMUST00000189716 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm28599-201ENSMUST00000189838 694 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21867-201ENSMUST00000189917 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm29269-201ENSMUST00000190087 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21722-201ENSMUST00000190153 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm28423-201ENSMUST00000190701 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21899-201ENSMUST00000190745 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21910-201ENSMUST00000191163 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21849-201ENSMUST00000191571 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm28678-201ENSMUST00000191593 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm20910-201ENSMUST00000193268 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Gm21871-201ENSMUST00000194621 696 ntBASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cchcr1Q8K2I2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.74■□□□□ 0.27
Cchcr1Q8K2I2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cchcr1Q8K2I2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms