Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgcs1Q8JZK9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgcs1Q8JZK9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgcs1Q8JZK9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgcs1Q8JZK9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hmgcs1Q8JZK9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgcs1Q8JZK9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hmgcs1Q8JZK9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgcs1Q8JZK9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgcs1Q8JZK9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgcs1Q8JZK9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgcs1Q8JZK9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgcs1Q8JZK9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgcs1Q8JZK9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgcs1Q8JZK9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgcs1Q8JZK9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Hmgcs1Q8JZK9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgcs1Q8JZK9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgcs1Q8JZK9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgcs1Q8JZK9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgcs1Q8JZK9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgcs1Q8JZK9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hmgcs1Q8JZK9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Gm10175-201ENSMUST00000086013 645 ntBASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgcs1Q8JZK9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.5□□□□□ -0.25
Hmgcs1Q8JZK9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Hmgcs1Q8JZK9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgcs1Q8JZK9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgcs1Q8JZK9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgcs1Q8JZK9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgcs1Q8JZK9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hmgcs1Q8JZK9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgcs1Q8JZK9 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.5□□□□□ -0.25
Hmgcs1Q8JZK9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgcs1Q8JZK9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgcs1Q8JZK9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms