Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.93■□□□□ 0.14
Syne4Q8CII8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.93■□□□□ 0.14
Syne4Q8CII8 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.93■□□□□ 0.14
Syne4Q8CII8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Gm27514-201ENSMUST00000183692 110 ntBASIC15.93■□□□□ 0.14
Syne4Q8CII8 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.93■□□□□ 0.14
Syne4Q8CII8 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.93■□□□□ 0.14
Syne4Q8CII8 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.93■□□□□ 0.14
Syne4Q8CII8 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.93■□□□□ 0.14
Syne4Q8CII8 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.93■□□□□ 0.14
Syne4Q8CII8 Gm6013-201ENSMUST00000212264 699 ntBASIC15.93■□□□□ 0.14
Syne4Q8CII8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.93■□□□□ 0.14
Syne4Q8CII8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.93■□□□□ 0.14
Syne4Q8CII8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syne4Q8CII8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Gm16177-201ENSMUST00000120728 718 ntBASIC15.92■□□□□ 0.14
Syne4Q8CII8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.92■□□□□ 0.14
Syne4Q8CII8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.92■□□□□ 0.14
Syne4Q8CII8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.91■□□□□ 0.14
Syne4Q8CII8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Gm18054-201ENSMUST00000207539 555 ntBASIC15.91■□□□□ 0.14
Syne4Q8CII8 Gm45880-201ENSMUST00000213041 853 ntBASIC15.91■□□□□ 0.14
Syne4Q8CII8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Mir497b-201ENSMUST00000093601 125 ntBASIC15.91■□□□□ 0.14
Syne4Q8CII8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms