Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ShfQ8CG80 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.62□□□□□ -0.39
ShfQ8CG80 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.62□□□□□ -0.39
ShfQ8CG80 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.62□□□□□ -0.39
ShfQ8CG80 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.62□□□□□ -0.39
ShfQ8CG80 Gm20553-201ENSMUST00000204205 844 ntBASIC12.62□□□□□ -0.39
ShfQ8CG80 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.62□□□□□ -0.39
ShfQ8CG80 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.62□□□□□ -0.39
ShfQ8CG80 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ShfQ8CG80 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ShfQ8CG80 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ShfQ8CG80 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.61□□□□□ -0.39
ShfQ8CG80 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.61□□□□□ -0.39
ShfQ8CG80 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.61□□□□□ -0.39
ShfQ8CG80 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.61□□□□□ -0.39
ShfQ8CG80 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.61□□□□□ -0.39
ShfQ8CG80 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Gm2810-201ENSMUST00000118681 990 ntBASIC12.61□□□□□ -0.39
ShfQ8CG80 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.61□□□□□ -0.39
ShfQ8CG80 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.61□□□□□ -0.39
ShfQ8CG80 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Gm2445-201ENSMUST00000182798 989 ntBASIC12.61□□□□□ -0.39
ShfQ8CG80 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.61□□□□□ -0.39
ShfQ8CG80 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.61□□□□□ -0.39
ShfQ8CG80 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.61□□□□□ -0.39
ShfQ8CG80 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
ShfQ8CG80 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ShfQ8CG80 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShfQ8CG80 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.61□□□□□ -0.39
ShfQ8CG80 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
ShfQ8CG80 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
ShfQ8CG80 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
ShfQ8CG80 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.6□□□□□ -0.39
ShfQ8CG80 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.6□□□□□ -0.39
ShfQ8CG80 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.6□□□□□ -0.39
ShfQ8CG80 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.6□□□□□ -0.39
ShfQ8CG80 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.6□□□□□ -0.39
ShfQ8CG80 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.6□□□□□ -0.39
ShfQ8CG80 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.6□□□□□ -0.39
ShfQ8CG80 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.6□□□□□ -0.39
ShfQ8CG80 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.6□□□□□ -0.39
ShfQ8CG80 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.6□□□□□ -0.39
ShfQ8CG80 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
ShfQ8CG80 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShfQ8CG80 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.6□□□□□ -0.39
ShfQ8CG80 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms