Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 BC001981-202ENSMUST00000191393 1545 ntBASIC17.5■□□□□ 0.39
Smc5Q8CG46 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc5Q8CG46 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smc5Q8CG46 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc5Q8CG46 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc5Q8CG46 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc5Q8CG46 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc5Q8CG46 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC17.5■□□□□ 0.39
Smc5Q8CG46 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc5Q8CG46 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smc5Q8CG46 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc5Q8CG46 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc5Q8CG46 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smc5Q8CG46 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.49■□□□□ 0.39
Smc5Q8CG46 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.49■□□□□ 0.39
Smc5Q8CG46 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.49■□□□□ 0.39
Smc5Q8CG46 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc5Q8CG46 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.48■□□□□ 0.39
Smc5Q8CG46 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Gm2810-201ENSMUST00000118681 990 ntBASIC17.48■□□□□ 0.39
Smc5Q8CG46 Gm1401-201ENSMUST00000122048 772 ntBASIC17.48■□□□□ 0.39
Smc5Q8CG46 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Gm18733-201ENSMUST00000173950 856 ntBASIC17.48■□□□□ 0.39
Smc5Q8CG46 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.48■□□□□ 0.39
Smc5Q8CG46 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.48■□□□□ 0.39
Smc5Q8CG46 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smc5Q8CG46 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.47■□□□□ 0.39
Smc5Q8CG46 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms