Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Gm8584-201ENSMUST00000171982 758 ntBASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28bQ8CEG5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Gm10729-202ENSMUST00000193403 1375 ntBASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Gm4899-201ENSMUST00000178708 719 ntBASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Gm8597-201ENSMUST00000191525 1109 ntBASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Gm9182-201ENSMUST00000217829 639 ntBASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Mmp14-206ENSMUST00000225641 3238 ntBASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28bQ8CEG5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms