Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rsph6aQ8CDR2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rsph6aQ8CDR2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rsph6aQ8CDR2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Gm11478-201ENSMUST00000117851 599 ntBASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Gm15376-201ENSMUST00000122258 783 ntBASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Gm45925-201ENSMUST00000218882 744 ntBASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rsph6aQ8CDR2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Gm28911-201ENSMUST00000188837 117 ntBASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Gm43094-201ENSMUST00000196549 921 ntBASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Gm19078-201ENSMUST00000206311 727 ntBASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsph6aQ8CDR2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph6aQ8CDR2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms