Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC18.7■□□□□ 0.58
Cps1Q8C196 Mir3102-201ENSMUST00000175555 104 ntBASIC18.7■□□□□ 0.58
Cps1Q8C196 Gm6222-202ENSMUST00000182143 629 ntBASIC18.7■□□□□ 0.58
Cps1Q8C196 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC18.7■□□□□ 0.58
Cps1Q8C196 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Cps1Q8C196 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.7■□□□□ 0.58
Cps1Q8C196 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC18.7■□□□□ 0.58
Cps1Q8C196 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC18.7■□□□□ 0.58
Cps1Q8C196 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cps1Q8C196 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cps1Q8C196 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Gm15808-201ENSMUST00000119046 604 ntBASIC18.69■□□□□ 0.58
Cps1Q8C196 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Cps1Q8C196 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC18.69■□□□□ 0.58
Cps1Q8C196 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cps1Q8C196 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Gm45865-201ENSMUST00000211815 945 ntBASIC18.69■□□□□ 0.58
Cps1Q8C196 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Cps1Q8C196 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.69■□□□□ 0.58
Cps1Q8C196 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cps1Q8C196 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cps1Q8C196 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cps1Q8C196 Gm25261-201ENSMUST00000157416 134 ntBASIC18.69■□□□□ 0.58
Cps1Q8C196 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC18.69■□□□□ 0.58
Cps1Q8C196 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Cps1Q8C196 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC18.69■□□□□ 0.58
Cps1Q8C196 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cps1Q8C196 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cps1Q8C196 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cps1Q8C196 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cps1Q8C196 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cps1Q8C196 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cps1Q8C196 Gm8337-201ENSMUST00000187358 1938 ntBASIC18.68■□□□□ 0.58
Cps1Q8C196 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cps1Q8C196 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cps1Q8C196 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cps1Q8C196 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cps1Q8C196 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cps1Q8C196 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cps1Q8C196 Gm12241-201ENSMUST00000118330 726 ntBASIC18.68■□□□□ 0.58
Cps1Q8C196 Gm29199-201ENSMUST00000187766 775 ntBASIC18.68■□□□□ 0.58
Cps1Q8C196 Gm44364-201ENSMUST00000198368 141 ntBASIC18.68■□□□□ 0.58
Cps1Q8C196 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cps1Q8C196 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cps1Q8C196 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cps1Q8C196 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cps1Q8C196 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC18.67■□□□□ 0.58
Cps1Q8C196 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.67■□□□□ 0.58
Cps1Q8C196 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC18.67■□□□□ 0.58
Cps1Q8C196 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC18.67■□□□□ 0.58
Cps1Q8C196 Gm7046-201ENSMUST00000221351 977 ntBASIC18.67■□□□□ 0.58
Cps1Q8C196 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cps1Q8C196 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms