Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm24752-201ENSMUST00000178240 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm24496-201ENSMUST00000178287 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm25649-201ENSMUST00000178476 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm25548-201ENSMUST00000178681 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm23147-201ENSMUST00000178841 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm26095-201ENSMUST00000179270 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm22171-201ENSMUST00000179283 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm23936-201ENSMUST00000179354 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm22619-201ENSMUST00000179516 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm25255-201ENSMUST00000179579 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm24755-201ENSMUST00000179691 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm26506-201ENSMUST00000179692 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm25086-201ENSMUST00000179931 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm23243-201ENSMUST00000180047 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm24659-201ENSMUST00000180212 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm24169-201ENSMUST00000180244 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm23689-201ENSMUST00000180354 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm27359-201ENSMUST00000184153 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm27785-201ENSMUST00000184268 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm27466-201ENSMUST00000184396 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm27703-201ENSMUST00000184836 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm18766-201ENSMUST00000189811 808 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm18049-201ENSMUST00000208909 581 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm5779-201ENSMUST00000218467 910 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh3rf3Q8C120 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sh3rf3Q8C120 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Sh3rf3Q8C120 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Sh3rf3Q8C120 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh3rf3Q8C120 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.77□□□□□ -0.04
Sh3rf3Q8C120 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.77□□□□□ -0.04
Sh3rf3Q8C120 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Sh3rf3Q8C120 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh3rf3Q8C120 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sh3rf3Q8C120 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.77□□□□□ -0.04
Sh3rf3Q8C120 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh3rf3Q8C120 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Gm5867-201ENSMUST00000063197 592 ntBASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf3Q8C120 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Acot6-202ENSMUST00000222921 3622 ntBASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Gm26308-201ENSMUST00000157768 69 ntBASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Gm9824-201ENSMUST00000178707 561 ntBASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms