Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Gm25144-201ENSMUST00000179561 110 ntBASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Gm25352-201ENSMUST00000179815 110 ntBASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Gm27430-201ENSMUST00000184585 107 ntBASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Gm44333-201ENSMUST00000197168 107 ntBASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.27■□□□□ 0.52
Ccdc30Q8BVF4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc30Q8BVF4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc30Q8BVF4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
Ccdc30Q8BVF4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc30Q8BVF4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc30Q8BVF4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc30Q8BVF4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Gm13223-201ENSMUST00000118609 747 ntBASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc30Q8BVF4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Gm15889-202ENSMUST00000212669 2443 ntBASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC18.24■□□□□ 0.51
Ccdc30Q8BVF4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Gm15653-201ENSMUST00000119247 907 ntBASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms