Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Gm2810-201ENSMUST00000118681 990 ntBASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Gm2451-201ENSMUST00000199447 999 ntBASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Gm10290-201ENSMUST00000200451 999 ntBASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4Q8BQZ5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Gm13616-201ENSMUST00000120600 222 ntBASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Gm11543-201ENSMUST00000120758 370 ntBASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4Q8BQZ5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Gm25948-201ENSMUST00000175334 112 ntBASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms