Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.07■□□□□ 0
Trim6Q8BGE7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.07■□□□□ 0
Trim6Q8BGE7 Gm9182-201ENSMUST00000217829 639 ntBASIC15.07■□□□□ 0
Trim6Q8BGE7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim6Q8BGE7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.07■□□□□ 0
Trim6Q8BGE7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim6Q8BGE7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim6Q8BGE7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.06■□□□□ 0
Trim6Q8BGE7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trim6Q8BGE7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.06■□□□□ 0
Trim6Q8BGE7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.06■□□□□ 0
Trim6Q8BGE7 Gm27300-201ENSMUST00000184085 97 ntBASIC15.06■□□□□ 0
Trim6Q8BGE7 Gm27335-201ENSMUST00000184758 97 ntBASIC15.06■□□□□ 0
Trim6Q8BGE7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.06■□□□□ 0
Trim6Q8BGE7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trim6Q8BGE7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.06■□□□□ 0
Trim6Q8BGE7 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.06■□□□□ 0
Trim6Q8BGE7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim6Q8BGE7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim6Q8BGE7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.05■□□□□ 0
Trim6Q8BGE7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.05■□□□□ 0
Trim6Q8BGE7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.05■□□□□ 0
Trim6Q8BGE7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim6Q8BGE7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 Mir8098-201ENSMUST00000184011 137 ntBASIC15.05■□□□□ -0
Trim6Q8BGE7 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC15.05■□□□□ -0
Trim6Q8BGE7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.05■□□□□ -0
Trim6Q8BGE7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.05■□□□□ -0
Trim6Q8BGE7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.05■□□□□ -0
Trim6Q8BGE7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.05■□□□□ -0
Trim6Q8BGE7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trim6Q8BGE7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.05■□□□□ -0
Trim6Q8BGE7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.05■□□□□ -0
Trim6Q8BGE7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 Grk6-205ENSMUST00000224653 2976 ntBASIC15.05■□□□□ -0
Trim6Q8BGE7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim6Q8BGE7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trim6Q8BGE7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Trim6Q8BGE7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim6Q8BGE7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim6Q8BGE7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim6Q8BGE7 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.04■□□□□ -0
Trim6Q8BGE7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.04■□□□□ -0
Trim6Q8BGE7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.04■□□□□ -0
Trim6Q8BGE7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.04■□□□□ -0
Trim6Q8BGE7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim6Q8BGE7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.04■□□□□ -0
Trim6Q8BGE7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.04■□□□□ -0
Trim6Q8BGE7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.04■□□□□ -0
Trim6Q8BGE7 Gm10154-201ENSMUST00000084445 354 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms