Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Gm16198-201ENSMUST00000118766 670 ntBASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bQ80YF6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Thap2-203ENSMUST00000218989 527 ntBASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bQ80YF6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Gm9103-201ENSMUST00000119371 405 ntBASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Gm11452-201ENSMUST00000122376 690 ntBASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk3bQ80YF6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk3bQ80YF6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk3bQ80YF6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk3bQ80YF6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Upk3bQ80YF6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk3bQ80YF6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Upk3bQ80YF6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms