Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Gm13385-201ENSMUST00000121089 220 ntBASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Gm1335-201ENSMUST00000121653 386 ntBASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Gm27682-201ENSMUST00000183930 110 ntBASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Gm42627-201ENSMUST00000197347 224 ntBASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.82□□□□□ -0.52
Ttc28Q80XJ3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Gm15371-201ENSMUST00000117057 784 ntBASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Gm7783-201ENSMUST00000204795 781 ntBASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Gm8927-201ENSMUST00000181978 981 ntBASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Gm3222-201ENSMUST00000071282 990 ntBASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ttc28Q80XJ3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ttc28Q80XJ3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms