Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3cQ80U95 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3cQ80U95 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3cQ80U95 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3cQ80U95 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3cQ80U95 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3cQ80U95 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3cQ80U95 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3cQ80U95 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3cQ80U95 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3cQ80U95 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.63■□□□□ 0.25
Ube3cQ80U95 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Gm15376-201ENSMUST00000122258 783 ntBASIC16.63■□□□□ 0.25
Ube3cQ80U95 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Gm24420-201ENSMUST00000176676 59 ntBASIC16.63■□□□□ 0.25
Ube3cQ80U95 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Gm19078-201ENSMUST00000206311 727 ntBASIC16.63■□□□□ 0.25
Ube3cQ80U95 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.63■□□□□ 0.25
Ube3cQ80U95 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.63■□□□□ 0.25
Ube3cQ80U95 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.63■□□□□ 0.25
Ube3cQ80U95 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Gm8584-201ENSMUST00000171982 758 ntBASIC16.62■□□□□ 0.25
Ube3cQ80U95 Gm27701-201ENSMUST00000184498 110 ntBASIC16.62■□□□□ 0.25
Ube3cQ80U95 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.62■□□□□ 0.25
Ube3cQ80U95 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.62■□□□□ 0.25
Ube3cQ80U95 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.62■□□□□ 0.25
Ube3cQ80U95 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.62■□□□□ 0.25
Ube3cQ80U95 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ube3cQ80U95 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Gm28911-201ENSMUST00000188837 117 ntBASIC16.61■□□□□ 0.25
Ube3cQ80U95 Gm29741-201ENSMUST00000192667 421 ntBASIC16.61■□□□□ 0.25
Ube3cQ80U95 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Gm18307-201ENSMUST00000206864 949 ntBASIC16.61■□□□□ 0.25
Ube3cQ80U95 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.61■□□□□ 0.25
Ube3cQ80U95 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ube3cQ80U95 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3cQ80U95 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3cQ80U95 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms