Protein–RNA interactions for Protein: Q80U56

Avl9, Late secretory pathway protein AVL9 homolog, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Avl9Q80U56 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Avl9Q80U56 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Avl9Q80U56 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Avl9Q80U56 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.69□□□□□ -0.22
Avl9Q80U56 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.69□□□□□ -0.22
Avl9Q80U56 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.69□□□□□ -0.22
Avl9Q80U56 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.69□□□□□ -0.22
Avl9Q80U56 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Gm9522-201ENSMUST00000182394 926 ntBASIC13.69□□□□□ -0.22
Avl9Q80U56 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.69□□□□□ -0.22
Avl9Q80U56 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.69□□□□□ -0.22
Avl9Q80U56 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Avl9Q80U56 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Avl9Q80U56 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Avl9Q80U56 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Avl9Q80U56 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Avl9Q80U56 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Avl9Q80U56 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Avl9Q80U56 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Avl9Q80U56 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Avl9Q80U56 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.68□□□□□ -0.22
Avl9Q80U56 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Avl9Q80U56 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Avl9Q80U56 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.68□□□□□ -0.22
Avl9Q80U56 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.68□□□□□ -0.22
Avl9Q80U56 Gm6218-201ENSMUST00000219812 628 ntBASIC13.68□□□□□ -0.22
Avl9Q80U56 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.68□□□□□ -0.22
Avl9Q80U56 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.68□□□□□ -0.22
Avl9Q80U56 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.68□□□□□ -0.22
Avl9Q80U56 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Avl9Q80U56 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Avl9Q80U56 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Avl9Q80U56 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.67□□□□□ -0.22
Avl9Q80U56 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.67□□□□□ -0.22
Avl9Q80U56 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Avl9Q80U56 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Avl9Q80U56 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Avl9Q80U56 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.67□□□□□ -0.22
Avl9Q80U56 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Avl9Q80U56 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.67□□□□□ -0.22
Avl9Q80U56 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.67□□□□□ -0.22
Avl9Q80U56 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Avl9Q80U56 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Avl9Q80U56 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Avl9Q80U56 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Avl9Q80U56 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms