Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.97□□□□□ -0.17
Pcdh8Q7TSK3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Gm12859-201ENSMUST00000117834 427 ntBASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh8Q7TSK3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh8Q7TSK3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh8Q7TSK3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh8Q7TSK3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Pcdh8Q7TSK3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh8Q7TSK3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh8Q7TSK3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh8Q7TSK3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms