Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Thap2-203ENSMUST00000218989 527 ntBASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Gm15590-201ENSMUST00000078419 552 ntBASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scaf4Q6PFF0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Gm15483-201ENSMUST00000120338 456 ntBASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Gm11452-201ENSMUST00000122376 690 ntBASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Gm27301-201ENSMUST00000184012 127 ntBASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scaf4Q6PFF0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scaf4Q6PFF0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scaf4Q6PFF0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Scaf4Q6PFF0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scaf4Q6PFF0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Scaf4Q6PFF0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.96□□□□□ -0.18
Scaf4Q6PFF0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Scaf4Q6PFF0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Gm5177-201ENSMUST00000183092 997 ntBASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms