Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Gm12644-201ENSMUST00000119935 606 ntBASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf220Q6PDX6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Celf4-206ENSMUST00000224553 1729 ntBASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf220Q6PDX6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms