Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Gm8410-201ENSMUST00000117225 605 ntBASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Gm15693-201ENSMUST00000120470 637 ntBASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Gm25948-201ENSMUST00000175334 112 ntBASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Gm5867-201ENSMUST00000063197 592 ntBASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Mir125a-201ENSMUST00000083545 68 ntBASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Herc4Q6PAV2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Gm8584-201ENSMUST00000171982 758 ntBASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Gm27430-201ENSMUST00000184585 107 ntBASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Gm28630-201ENSMUST00000187806 498 ntBASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Gm44333-201ENSMUST00000197168 107 ntBASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herc4Q6PAV2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Herc4Q6PAV2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms