Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Gm16476-201ENSMUST00000221544 139 ntBASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb4Q6P8W9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Gm43703-201ENSMUST00000200523 763 ntBASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Gm7653-201ENSMUST00000214567 508 ntBASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb4Q6P8W9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Gm8749-201ENSMUST00000117737 331 ntBASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Gm12859-201ENSMUST00000117834 427 ntBASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Gm24694-201ENSMUST00000180054 110 ntBASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Gm27663-201ENSMUST00000184839 110 ntBASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Gm9182-201ENSMUST00000217829 639 ntBASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb4Q6P8W9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Hmgb4Q6P8W9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgb4Q6P8W9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgb4Q6P8W9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms