Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm2445-201ENSMUST00000182798 989 ntBASIC21.42■■□□□ 1.02
Slx4Q6P1D7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC21.42■■□□□ 1.02
Slx4Q6P1D7 Gm8227-201ENSMUST00000223306 571 ntBASIC21.42■■□□□ 1.02
Slx4Q6P1D7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slx4Q6P1D7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slx4Q6P1D7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Slx4Q6P1D7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slx4Q6P1D7 Gm44207-201ENSMUST00000204568 1424 ntBASIC21.42■■□□□ 1.02
Slx4Q6P1D7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slx4Q6P1D7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slx4Q6P1D7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Gm13369-201ENSMUST00000119442 987 ntBASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Gm2991-201ENSMUST00000173338 480 ntBASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC21.41■■□□□ 1.02
Slx4Q6P1D7 AC155637.1-201ENSMUST00000218560 636 ntBASIC21.41■■□□□ 1.02
Slx4Q6P1D7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Gm9755-201ENSMUST00000032981 1356 ntBASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slx4Q6P1D7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Gm13123-201ENSMUST00000122173 492 ntBASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Gm17376-201ENSMUST00000166016 84 ntBASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Gm9347-201ENSMUST00000211473 1607 ntBASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Gm2383-201ENSMUST00000181461 807 ntBASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Gm6222-202ENSMUST00000182143 629 ntBASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC21.4■■□□□ 1.02
Slx4Q6P1D7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC21.4■■□□□ 1.02
Slx4Q6P1D7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slx4Q6P1D7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slx4Q6P1D7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Slx4Q6P1D7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Gm24255-201ENSMUST00000104481 128 ntBASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slx4Q6P1D7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Gm15544-201ENSMUST00000118776 1531 ntBASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms