Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Mir6990-201ENSMUST00000183724 91 ntBASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Gm44335-201ENSMUST00000196879 141 ntBASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Gm44297-201ENSMUST00000198304 141 ntBASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Gm44346-201ENSMUST00000198851 141 ntBASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Gm43125-201ENSMUST00000201724 730 ntBASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Acot6-202ENSMUST00000222921 3622 ntBASIC14.38□□□□□ -0.11
Sp140Q6NSQ5 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Gm13823-201ENSMUST00000119930 345 ntBASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sp140Q6NSQ5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Matn2-206ENSMUST00000228570 2798 ntBASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms