Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.91□□□□□ -0.02
Scube3Q66PY1 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.91□□□□□ -0.02
Scube3Q66PY1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.91□□□□□ -0.02
Scube3Q66PY1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.9□□□□□ -0.02
Scube3Q66PY1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Gm43703-201ENSMUST00000200523 763 ntBASIC14.9□□□□□ -0.02
Scube3Q66PY1 Gm18363-201ENSMUST00000221671 730 ntBASIC14.9□□□□□ -0.02
Scube3Q66PY1 Gm9229-201ENSMUST00000222777 126 ntBASIC14.9□□□□□ -0.02
Scube3Q66PY1 AC125117.2-201ENSMUST00000228344 1140 ntBASIC14.9□□□□□ -0.02
Scube3Q66PY1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scube3Q66PY1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.89□□□□□ -0.03
Scube3Q66PY1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.89□□□□□ -0.03
Scube3Q66PY1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scube3Q66PY1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scube3Q66PY1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scube3Q66PY1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scube3Q66PY1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scube3Q66PY1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scube3Q66PY1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scube3Q66PY1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scube3Q66PY1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scube3Q66PY1 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.88□□□□□ -0.03
Scube3Q66PY1 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scube3Q66PY1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms