Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Clcn1Q64347 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn1Q64347 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn1Q64347 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn1Q64347 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn1Q64347 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Clcn1Q64347 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn1Q64347 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.9■□□□□ 0.46
Clcn1Q64347 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Clcn1Q64347 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.9■□□□□ 0.46
Clcn1Q64347 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Clcn1Q64347 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn1Q64347 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Clcn1Q64347 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn1Q64347 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn1Q64347 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.9■□□□□ 0.46
Clcn1Q64347 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn1Q64347 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn1Q64347 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Clcn1Q64347 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
Clcn1Q64347 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clcn1Q64347 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Clcn1Q64347 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clcn1Q64347 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clcn1Q64347 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Clcn1Q64347 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Clcn1Q64347 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Clcn1Q64347 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.89■□□□□ 0.45
Clcn1Q64347 AY702102-202ENSMUST00000194651 1173 ntBASIC17.89■□□□□ 0.45
Clcn1Q64347 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.89■□□□□ 0.45
Clcn1Q64347 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 Gm25007-201ENSMUST00000083808 133 ntBASIC17.89■□□□□ 0.45
Clcn1Q64347 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn1Q64347 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Clcn1Q64347 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
Clcn1Q64347 Gm12882-201ENSMUST00000121696 517 ntBASIC17.88■□□□□ 0.45
Clcn1Q64347 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.88■□□□□ 0.45
Clcn1Q64347 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clcn1Q64347 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.88■□□□□ 0.45
Clcn1Q64347 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.88■□□□□ 0.45
Clcn1Q64347 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.88■□□□□ 0.45
Clcn1Q64347 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clcn1Q64347 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clcn1Q64347 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.88■□□□□ 0.45
Clcn1Q64347 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn1Q64347 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.87■□□□□ 0.45
Clcn1Q64347 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.87■□□□□ 0.45
Clcn1Q64347 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.87■□□□□ 0.45
Clcn1Q64347 Mir1982-201ENSMUST00000157368 74 ntBASIC17.87■□□□□ 0.45
Clcn1Q64347 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.87■□□□□ 0.45
Clcn1Q64347 Gm18307-201ENSMUST00000206864 949 ntBASIC17.87■□□□□ 0.45
Clcn1Q64347 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.87■□□□□ 0.45
Clcn1Q64347 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.87■□□□□ 0.45
Clcn1Q64347 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.87■□□□□ 0.45
Clcn1Q64347 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Clcn1Q64347 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.87■□□□□ 0.45
Clcn1Q64347 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Clcn1Q64347 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms