Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Commd3Q63829 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.78□□□□□ -0.52
Commd3Q63829 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.78□□□□□ -0.52
Commd3Q63829 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.78□□□□□ -0.52
Commd3Q63829 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Commd3Q63829 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Commd3Q63829 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Commd3Q63829 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Commd3Q63829 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Commd3Q63829 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Commd3Q63829 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Commd3Q63829 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Commd3Q63829 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Commd3Q63829 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Commd3Q63829 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Commd3Q63829 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Commd3Q63829 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Commd3Q63829 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Commd3Q63829 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.77□□□□□ -0.53
Commd3Q63829 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.77□□□□□ -0.53
Commd3Q63829 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.77□□□□□ -0.53
Commd3Q63829 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Gm27742-201ENSMUST00000184667 60 ntBASIC11.77□□□□□ -0.53
Commd3Q63829 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Commd3Q63829 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Commd3Q63829 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.77□□□□□ -0.53
Commd3Q63829 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Commd3Q63829 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.77□□□□□ -0.53
Commd3Q63829 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Commd3Q63829 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Commd3Q63829 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Commd3Q63829 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Commd3Q63829 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.76□□□□□ -0.53
Commd3Q63829 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Commd3Q63829 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.76□□□□□ -0.53
Commd3Q63829 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Commd3Q63829 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms