Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn9aQ62205 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn9aQ62205 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn9aQ62205 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn9aQ62205 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn9aQ62205 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Gm6023-201ENSMUST00000118217 606 ntBASIC16.35■□□□□ 0.21
Scn9aQ62205 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.35■□□□□ 0.21
Scn9aQ62205 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.35■□□□□ 0.21
Scn9aQ62205 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Scn9aQ62205 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.35■□□□□ 0.21
Scn9aQ62205 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Gm10268-201ENSMUST00000085340 555 ntBASIC16.35■□□□□ 0.21
Scn9aQ62205 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Scn9aQ62205 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Scn9aQ62205 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.35■□□□□ 0.21
Scn9aQ62205 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.35■□□□□ 0.21
Scn9aQ62205 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.35■□□□□ 0.21
Scn9aQ62205 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Scn9aQ62205 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Scn9aQ62205 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Scn9aQ62205 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Scn9aQ62205 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Scn9aQ62205 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Scn9aQ62205 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Scn9aQ62205 Mir433-201ENSMUST00000093564 124 ntBASIC16.35■□□□□ 0.21
Scn9aQ62205 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn9aQ62205 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn9aQ62205 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn9aQ62205 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Scn9aQ62205 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn9aQ62205 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn9aQ62205 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn9aQ62205 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn9aQ62205 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Scn9aQ62205 Gm12997-201ENSMUST00000120207 640 ntBASIC16.34■□□□□ 0.21
Scn9aQ62205 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.34■□□□□ 0.21
Scn9aQ62205 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.34■□□□□ 0.21
Scn9aQ62205 Gm17376-201ENSMUST00000166016 84 ntBASIC16.34■□□□□ 0.21
Scn9aQ62205 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.34■□□□□ 0.21
Scn9aQ62205 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.34■□□□□ 0.21
Scn9aQ62205 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn9aQ62205 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.34■□□□□ 0.21
Scn9aQ62205 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn9aQ62205 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn9aQ62205 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn9aQ62205 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn9aQ62205 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn9aQ62205 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn9aQ62205 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.33■□□□□ 0.21
Scn9aQ62205 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn9aQ62205 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Scn9aQ62205 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn9aQ62205 Gm15770-201ENSMUST00000117498 584 ntBASIC16.33■□□□□ 0.21
Scn9aQ62205 Gm13369-201ENSMUST00000119442 987 ntBASIC16.33■□□□□ 0.21
Scn9aQ62205 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.33■□□□□ 0.21
Scn9aQ62205 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Scn9aQ62205 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Scn9aQ62205 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.33■□□□□ 0.21
Scn9aQ62205 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.33■□□□□ 0.21
Scn9aQ62205 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.33■□□□□ 0.21
Scn9aQ62205 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn9aQ62205 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Scn9aQ62205 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Scn9aQ62205 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn9aQ62205 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn9aQ62205 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn9aQ62205 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn9aQ62205 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.33■□□□□ 0.2
Scn9aQ62205 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn9aQ62205 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn9aQ62205 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Scn9aQ62205 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn9aQ62205 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn9aQ62205 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.33■□□□□ 0.2
Scn9aQ62205 Gm8584-201ENSMUST00000171982 758 ntBASIC16.33■□□□□ 0.2
Scn9aQ62205 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.33■□□□□ 0.2
Scn9aQ62205 Gm27320-201ENSMUST00000184892 109 ntBASIC16.33■□□□□ 0.2
Scn9aQ62205 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn9aQ62205 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn9aQ62205 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms