Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm7488-201ENSMUST00000117148 684 ntBASIC16.69■□□□□ 0.26
Ctr9Q62018 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ctr9Q62018 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.69■□□□□ 0.26
Ctr9Q62018 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ctr9Q62018 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Ctr9Q62018 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.69■□□□□ 0.26
Ctr9Q62018 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.69■□□□□ 0.26
Ctr9Q62018 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ctr9Q62018 Gm6218-201ENSMUST00000219812 628 ntBASIC16.69■□□□□ 0.26
Ctr9Q62018 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.69■□□□□ 0.26
Ctr9Q62018 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ctr9Q62018 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctr9Q62018 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctr9Q62018 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctr9Q62018 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.69■□□□□ 0.26
Ctr9Q62018 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctr9Q62018 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ctr9Q62018 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.69■□□□□ 0.26
Ctr9Q62018 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctr9Q62018 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctr9Q62018 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctr9Q62018 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctr9Q62018 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ctr9Q62018 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Ctr9Q62018 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.68■□□□□ 0.26
Ctr9Q62018 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Gm12585-201ENSMUST00000117307 290 ntBASIC16.68■□□□□ 0.26
Ctr9Q62018 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Ctr9Q62018 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.68■□□□□ 0.26
Ctr9Q62018 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ctr9Q62018 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctr9Q62018 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ctr9Q62018 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ctr9Q62018 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ctr9Q62018 Gm15393-201ENSMUST00000120499 219 ntBASIC16.67■□□□□ 0.26
Ctr9Q62018 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.67■□□□□ 0.26
Ctr9Q62018 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Gm44608-201ENSMUST00000206827 855 ntBASIC16.67■□□□□ 0.26
Ctr9Q62018 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.67■□□□□ 0.26
Ctr9Q62018 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.67■□□□□ 0.26
Ctr9Q62018 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.67■□□□□ 0.26
Ctr9Q62018 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctr9Q62018 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.66■□□□□ 0.26
Ctr9Q62018 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctr9Q62018 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Ctr9Q62018 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.66■□□□□ 0.26
Ctr9Q62018 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctr9Q62018 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctr9Q62018 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ctr9Q62018 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.66■□□□□ 0.26
Ctr9Q62018 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctr9Q62018 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctr9Q62018 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Ctr9Q62018 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctr9Q62018 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.66■□□□□ 0.26
Ctr9Q62018 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.66■□□□□ 0.26
Ctr9Q62018 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.66■□□□□ 0.26
Ctr9Q62018 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctr9Q62018 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctr9Q62018 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctr9Q62018 Gm22189-201ENSMUST00000103822 86 ntBASIC16.66■□□□□ 0.26
Ctr9Q62018 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Ctr9Q62018 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.66■□□□□ 0.26
Ctr9Q62018 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ctr9Q62018 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.66■□□□□ 0.26
Ctr9Q62018 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms