Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Foxc1Q61572 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.51□□□□□ -0.73
Foxc1Q61572 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.51□□□□□ -0.73
Foxc1Q61572 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm12752-201ENSMUST00000121657 811 ntBASIC10.51□□□□□ -0.73
Foxc1Q61572 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Foxc1Q61572 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Ighv10-4-201ENSMUST00000193702 299 ntBASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm37017-201ENSMUST00000195266 747 ntBASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm7774-201ENSMUST00000200064 533 ntBASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm6312-201ENSMUST00000204060 1194 ntBASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm20553-201ENSMUST00000204205 844 ntBASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm19212-201ENSMUST00000216642 862 ntBASIC10.51□□□□□ -0.73
Foxc1Q61572 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Foxc1Q61572 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC10.51□□□□□ -0.73
Foxc1Q61572 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm38391-201ENSMUST00000191720 4069 ntBASIC10.51□□□□□ -0.73
Foxc1Q61572 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
Foxc1Q61572 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm37965-201ENSMUST00000195304 1362 ntBASIC10.51□□□□□ -0.73
Foxc1Q61572 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxc1Q61572 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.5□□□□□ -0.73
Foxc1Q61572 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Foxc1Q61572 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Foxc1Q61572 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Foxc1Q61572 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.5□□□□□ -0.73
Foxc1Q61572 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms