Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ccne1Q61457 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccne1Q61457 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccne1Q61457 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Ccne1Q61457 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
Ccne1Q61457 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccne1Q61457 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccne1Q61457 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccne1Q61457 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccne1Q61457 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC18.33■□□□□ 0.52
Ccne1Q61457 Gm8652-201ENSMUST00000181363 964 ntBASIC18.33■□□□□ 0.52
Ccne1Q61457 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC18.33■□□□□ 0.52
Ccne1Q61457 Gm6007-201ENSMUST00000208170 823 ntBASIC18.33■□□□□ 0.52
Ccne1Q61457 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.33■□□□□ 0.52
Ccne1Q61457 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccne1Q61457 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccne1Q61457 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccne1Q61457 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccne1Q61457 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccne1Q61457 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ccne1Q61457 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccne1Q61457 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccne1Q61457 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccne1Q61457 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Ccne1Q61457 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccne1Q61457 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ccne1Q61457 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ccne1Q61457 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ccne1Q61457 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccne1Q61457 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ccne1Q61457 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ccne1Q61457 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ccne1Q61457 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Ccne1Q61457 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ccne1Q61457 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ccne1Q61457 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccne1Q61457 Gm27486-201ENSMUST00000184923 80 ntBASIC18.31■□□□□ 0.52
Ccne1Q61457 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccne1Q61457 Gm5276-201ENSMUST00000196683 1047 ntBASIC18.31■□□□□ 0.52
Ccne1Q61457 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
Ccne1Q61457 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ccne1Q61457 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccne1Q61457 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccne1Q61457 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccne1Q61457 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccne1Q61457 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.3■□□□□ 0.52
Ccne1Q61457 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.3■□□□□ 0.52
Ccne1Q61457 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccne1Q61457 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccne1Q61457 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccne1Q61457 Gm12957-201ENSMUST00000117835 377 ntBASIC18.3■□□□□ 0.52
Ccne1Q61457 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccne1Q61457 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC18.3■□□□□ 0.52
Ccne1Q61457 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.3■□□□□ 0.52
Ccne1Q61457 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC18.3■□□□□ 0.52
Ccne1Q61457 Gm7561-201ENSMUST00000211203 886 ntBASIC18.3■□□□□ 0.52
Ccne1Q61457 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccne1Q61457 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccne1Q61457 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccne1Q61457 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccne1Q61457 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccne1Q61457 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms